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Genomics
Sequence microbial, plant and animal genomes for de novo assembly or resequencing — short-read and long-read workflows matched to genome size and study goals.
Service options
Not sure which option matches your project? A complimentary technical consultation helps you pick based on sample quality, input and objectives.
Oxford Nanopore and PacBio HiFi genomes — contiguous assemblies, structural variants and complex or polyploid regions resolved end-to-end.
Request this serviceHigh-depth Illumina whole-genome sequencing for resequencing, variant discovery and population-scale microbial, plant and animal cohorts.
Request this serviceThe Gateway advantage
Extraction, library prep, sequencing and bioinformatics managed in one laboratory chain.
Bacterial and fungal isolates through to plant, livestock and human genomes — workflow sized to genome complexity.
Illumina short-read, Oxford Nanopore and PacBio long-read platforms matched to the study.
PhD guidance on coverage, platform choice, QC and variant interpretation.
Automated workflows keep large cohorts and routine isolates moving.
Formal QC documentation at every checkpoint before sequencing.
Laboratory workflow & QA
Step 1
Align organism, coverage targets and platform — short-read resequencing or long-read assembly.
Step 2
Register samples online and arrange tracked shipment or courier pickup.
Step 3
Qubit and TapeStation or Fragment Analyzer reports shared for sign-off.
Step 4
Balanced libraries run on Illumina, ONT or PacBio platforms.
Step 5
FASTQ, assemblies or variant calls delivered securely, with annotation available.
Beyond the FASTQ
Pipelines range from de novo assembly and annotation through resequencing variant calls — germline, somatic and microbial.
Deliverables include
FASTQ files
QC report
De novo assembly (FASTA)
Assembly metrics & completeness
Alignment files (BAM)
FASTQ files
QC report
De novo assembly (FASTA)
Assembly metrics & completeness
Alignment files (BAM)
Germline & somatic VCF
Variant annotation
Copy-number profiles
Structural variant calls
Publication-ready figures
Germline & somatic VCF
Variant annotation
Copy-number profiles
Structural variant calls
Publication-ready figures
Figures & files delivered with every project — hover to pause
Applications
Complete or draft assemblies for bacterial and fungal isolates — AMR, virulence and typing.
Assembly and resequencing for breeding, diversity and trait-mapping studies.
Population genomics, parentage and trait discovery across breeding programs.
Pinpoint causative coding and non-coding variants in research cohorts.
Resolve inversions, duplications, translocations and haplotype context with long reads.
FAQs
Explore related sequencing solutions
Tell us about your organism and goals — a scientist replies within one business day with the right workflow and a tailored quote.
Share your samples and goals — a doctoral-level scientist responds within one business day with a study plan and competing blind quotes.
Administered by Syntax of Life Private Limited
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